STAINING METHODS

 
  • Falk, M. (2002). Genetic tags for labelling live cells: gap junctions and beyond. TICB. 12, 399-404.
  • Guignet, et al. (2005). Reversible site-selective labeling of membrane proteins in live cells.Nature Biotechnology 22, 440 – 444.
  • Martin, et al. (2005). Mammalian cell−based optimization of the biarsenical-binding tetracysteine motif for improved fluorescence and affinity. Nature Biotechnology. 23, 1308 – 1314.
  • Chen, et al. (2005). Site-specific labeling of cell surface proteins with biophysical probes using biotin ligase. Nature Methods. 2, 99 – 104.
  • Kuerschner, et al. (2005). Polyene-lipids: A new tool to image lipids. Nature Methods. 2, 39 – 45.
  • Giepmans, et al. (2006). The Fluorescent Toolbox for Assessing Protein Location and Function. Science. 312, 217-224.
  • Pinaud, et al. (2006). Advances in fluorescence imaging with quantum dot bio-probes. Biomaterials. 27, 1679-1687.
  • Marks and Nolan. (2006). Chemical labeling strategies for cell biology. Nature Methods. 3, 591 – 596.
  • Keppler, et al. (2006). Fluorophores for live cell imaging of AGT fusion proteins across the visible spectrum. BioTechniques. 41, 167-175.
  • Terasaki, et al. (2007). Fluorescent Staining of Subcellular Organelles: ER, Golgi Complex, and Mitochondria. Current Protocols in Cell Biology. Unit 4.4.
  • Organelle Atlas: Appendix to Chapter 4. Current Protocols in Cell Biology. Unit 4A.
  • Roberti, et al. (2007). Fluorescence imaging of amyloid formation in living cells by a functional, tetracysteine-tagged -synuclein. Nat. Methods. 4, 345-351.
  • Lidke, et al. (2007) In Vivo Imaging Using Quantum Dot–Conjugated Probes. Curr. Protoc. Cell Biol. 36:25.1.1-25.1.18
  • Smith, C. (2007) Keeping tabs on fluorescent tags. Nature Methods. 4, 755-761.
  • Resch-Genger, et al. (2008). Quantum dots versus organic dyes as fluorescent labels. Nature Methods 5, 763-775.
  • Volpi and Bridger. (2008). FISH glossary: an overview of the fluorescence in situ hybridization technique. BioTechniques. 45, 385-409.
  • Sanjay Tyagi. (2009). Imaging intracellular RNA distribution and dynamics in living cells. Nature Methods 6, 331 – 338.
  • Jelínková, et al. 2009. Probing plant membranes with FM dyes: tracking, dragging or blocking? The Plant Journal. 61, 883-892.
  • Hwang, et al. (2009). ReAsH: another viable option for in vivo protein labelling in Dictyostelium. Journal of Microscopy. 234, 9-15.
  • Imaging Cell Biology. (2009). Trends in Cell Biology. 19, 553-668.
  • Komatsu, et al. (2010). Organelle-specific, rapid induction of molecular activities and membrane tethering. Nature Methods. 7, 206-208.
  • Pinaud, et al. (2010) Probing cellular events, one quantum dot at a time. Nature Methods. 7, 275-285.
  • L. Dehmelt and P. Bastiaens. (2010). Spatial organization of intracellular communication: insights from imaging. Nature Reviews Molecular Cell Biology. 11, 440-452.
  • Uttamapinant, et al. (2010). A fluorophore ligase for site-specific protein labeling inside living cells. PNAS. 107, 10914–10919.
  • Holleran, et al. (2010). Fluorogen-activating proteins as biosensors of cell-surface proteins in living cells. Cytometry Part A, 77A: 776–782.
  • Monya Baker. (2010). Nanotechnology imaging probes: smaller and more stable.Nature Methods. 7, 957–962.
  • Dempsey, et al. (2011). Evaluation of fluorophores for optimal performance in localization-based super-resolution imaging. Nature Methods. 8,1027–1036
  • Hama, et al. (2011). Scale: a chemical approach for fluorescence imaging and reconstruction of transparent mouse brain. Nature Neuroscience. 14, 1481–1488.
  • Henneberger, et al. (2011). The fluorescent dyes TO-PRO-3 and TOTO-3 iodide allow detection of microbial cells in soil samples without interference from background fluorescence. BioTechniques, 51, No. 3, 190–192.
  • Lippert, et al. (2011). Reaction-Based Fluorecent Probes for Selective Imaging of Hydrogen Sulfide in Living Cells. J. Am. Chem. Soc., 133 (26), 10078–10080
  • Neef, Anee B. and Luedtke, Nathan W. ( 2011). Dynamic metabolic labeling of DNA in vivo with arabinosyl nucleosides. PNAS. 108 nº 51, 20404-20409
  • Yuan, et al. (2012). Single Fluorescent Probe Responds to H2O2, NO, and H2O2/NO with Three Different Sets of Fluorescence Signals. J. Am. Chem. Soc.134 (2), 1305–1315
  • Piterburg, et al. (2012). Photoconversion of DAPI following UV or violet excitation can cause DAPI to fluoresce with blue or cyan excitation. J. Microscopy. 246, 89-95.
  • Crivat and Taraska. (2012). Imaging proteins inside cells with fluorescence tags. Trends in Biotech. 30, 8-16.
  • Methods of Enzymology Vol. 504 (2012). Ed. Michael Conn. Imaging and Spectroscopy Analysis of Living Cells: Optical and Spectroscopy Techniques.
  • Methods of Enzymology Vol. 505 (2012). Ed. Michael Conn. Imaging and Spectroscopy Analysis of Living Cells: Optical and Spectroscopy Techniques.
  • Methods of Enzymology Vol. 506 (2012). Ed. Michael Conn. Imaging and Spectroscopy Analysis of Living Cells: Optical and Spectroscopy Techniques.
  • Johnson and Rabinovitch. (2012) Ex Vivo Imaging of Excised Tissue Using Vital Dyes and Confocal Microscopy. Current Protocols in Cytometry. 9.39.1-9.39.18.
  • Zongwen and Hildebrandt. (2012). Semiconductor quantum dots for in vitro diagnostics and cellular imaging. Trends in Biotech. 30, 394-403.
  • Dolman, et al. (2013). A Review of Reagents for Fluorescence Microscopy of Cellular Compartments and Structures, Part I: BacMam Labeling and Reagents for Vesicular Structures.Curr. Protoc. Citom. 65, 12.30.1-12.30.27.
  • Ozawa, et al. (2013). Advances in Fluorescence and Bioluminscence Imaging. Analytical Chemistry. 85, 590-609.
  • Cheng, et al. (2013). Chemical tags: inspiration for advanced imaging techniques. Current Opinion Chemical Biology. 17, 637-643.
  • Maity, et al. (2013). Immunostaining: Detection of Signaling Protein Location in Tissues, Cells and Subcellular Compartments. Methods in Cell Biology. 113, 81-105.
  • Biela, et al. (2013). Col-F, a fluorescent probe for ex vivo confocal imaging of collagen and elastin in animal tissues. Cytometry, 83A: 533–539.
  • Kilgore, et al. (2013). A Review of Reagents for Fluorescence Microscopy of Cellular Compartments and Structures, Part II: Reagents for Non-Vesicular Organelles. Curr. Protoc. Citom. 12.31.1-12.34.24.
  • Constantini and Snapp. (2013). Probing Endoplasmic Reticulum Dynamics using Fluorescence Imaging and Photobleaching Techniques. Curr. Protoc. Cell Biol. Unit 21.7.
  • Verissimo and Pepperkok. (2013). Imaging ER-to-Golgi transport: towards a system view. JCS. 126, 5091-5100.
  • Kilgore, et al. (2014). A Review of Reagents for Fluorescence Microscopy of Cellular Compartments and Structures, Part III: Reagents for actin, tubulin, cellular membranes, and whole cell an cytoplasm. Curr. Protoc. Citom. Unit 12.32.
  • Zhang, et al. (2014). Imaging and tracing of intracellular metabolites utilizing genetically encoded fluorescent biosensors. Biotechnology Journal. 8, 1280-1291.
  • Revelo, et al. (2014). A new probe for super-resolution imaging of membranes elucidates trafficking pathways. JCB. 205, 591-606.
  • Bosch, et al. (2014). Evaluation of Fluorophores to Label SNAP-Tag Fused Proteins for Multicolor Single-Molecule Tracking Microscopy in Live Cells. Biophysical Journal. 107, 803-814.
  • Mukherjee and Schroeder. (2015). Flavin-based fluorescent proteins: emerging paradigms in biological imaging. Curr. Op. Biotech. 31, 16-23.
  • Sakaguchi, et al. (2015). Fluorescent sensors reveal subcellular thermal changes. Curr. Op. Biotech. 31, 57-64.